Author

Hailin Wei

Tongji University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 1 Research Focus:gene regulatory network inference· 1 Assay:multiome· 1 Research Focus:perturbation response prediction· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Chenfei WangiD· 2 shared Caibin Zhou· 1 shared Ke TangiD· 1 shared Pengpeng Wu· 1 shared Tong HaniD· 1 shared Xihao Sherlock HuiD· 1 shared Xin DongiD· 1 shared Xinwei Zheng· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBioinformatics

Chenfei WangORCID

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2 papers

Recent·Most cited

Decoding Single-Cell Omics of Perturbation Responses Using DeSCOPE

Pengpeng Wu, Hailin Wei, Yazi Li, Xinwei Zheng, Caibin Zhou, Xihao Sherlock Hu, Chenfei Wang

DeSCOPE is a variational autoencoder framework for predicting genetic perturbation responses across multiple omics modalities, outperforming baselines in unseen gene and cell type scenarios.

bioRxiv · Apr 15, 2026 · PreprintBioinformatics

Single-cell Gene Regulation Network Inference by Large-scale Data Integration

Xin Dong, Ke Tang, Yunfan Xu, Hailin Wei, Tong Han, Chenfei Wang

This paper introduces SCRIP, a method that integrates scATAC-seq and TR ChIP-seq data to infer single-cell TR activity and gene regulation networks, showing improved performance over existing methods.

Nucleic Acids Research · Sep 14, 2022Peer-reviewedBioinformatics