Author

Harish Nagarajan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Research Focus:metabolism & bioenergetics· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Hamidreza Chitsaz· 1 shared Hirokazu Sato· 1 shared Hongjun Huang· 1 shared Julia Khandurina· 1 shared Karsten Zengler· 1 shared Mallory Embree· 1 shared Narjes S. Movahedi· 1 shared Richard M. Murray· 1 shared

Activity by Year

2014-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Hamidreza Chitsaz

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2 papers

Recent·Most cited

System-level studies of a cell-free transcription-translation platform for metabolic engineering

Yong Y. Wu, Hirokazu Sato, Hongjun Huang, Stephanie J. Culler, Julia Khandurina, Harish Nagarajan, Tae Hoon Yang, Stephen Van Dien, Richard M. Murray

The paper demonstrates the use of a cell-free TX-TL system to rapidly engineer and optimize the BDO pathway for improved product yield.

bioRxiv · Aug 3, 2017 · PreprintBioengineering

Efficient synergistic single-cell genome assembly

Narjes S. Movahedi, Zeinab Taghavi, Mallory Embree, Harish Nagarajan, Karsten Zengler, Hamidreza Chitsaz

This paper introduces HyDA, a co-assembly algorithm that improves single-cell genome assembly quality by combining multiple datasets, resulting in longer contigs and more complete genomes.

bioRxiv · Feb 24, 2014Bioinformatics