Author

Hong Zhao

University of Washington

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:human· 1

Frequent Co-Authors

Addy Cecilia Helguera‐RepettoiD· 1 shared Akshaj Bharadwaj· 1 shared Alec P. PankowiD· 1 shared Alexandra Christodolou· 1 shared Allan C. deCampiD· 1 shared Amanda LiiD· 1 shared Andrea Olmos‐OrtiziD· 1 shared Andrew E VoiD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Addy Cecilia Helguera‐RepettoORCID

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Author profile →

3 papers

Recent·Most cited

CucurbitAgent: An AI agent for exploring cucurbit multi-omics resources

Rong Zhang, Jian Zhang, Yuming Zhang, Xiaofei Zhang, Jingjing Yang, Changxuan Xia, Jialong Zhang, Hong Zhao, Changlong Wen

CucurbitAgent is an AI agent that integrates multi-omics data and literature for cucurbit crops, achieving high accuracy in answering gene-specific queries.

bioRxiv · Oct 16, 2026 · PreprintBioinformatics

A single-cell transcriptomic atlas of the periventricular proliferative zone in the late gestation fetal brain in the pigtail macaque

John A. Cornelius, Megana Shivakumar, Taeyun Kim, Orlando Cervantes, Raj P. Kapur, Hazel Huang, Hong Zhao, Briana Del Rosario, Amanda Li, Richard Li, Sidney Sun, Andrew E Vo, Gygeria Manuel, Akshaj Bharadwaj, JEFFREY A. MUNSON, , Kristina M. Adams Waldorf

The paper constructs a single-cell RNA-Seq atlas of the periventricular proliferative zone in late-gestation pigtail macaque fetal brain, revealing cell states similar to human fetal brain.

Frontiers in Neuroscience · Aug 3, 2026Peer-reviewedGenomics

Influence of the broadly neutralizing antibody VRC01 on HIV breakthrough virus populations in antibody-mediated prevention trials

Carolyn E. Williamson, Chivonne Moodley, Craig A. Magaret, Elena E. Giorgi, Morgane Rolland, Dylan H. Westfall, Anna Yssel, Wenjie Deng, Raabya Rossenkhan, Nonhlanhla N. Mkhize, Lennie Chen, Hong Zhao, Tanmoy Bhattacharya A, Alec P. Pankow, Ben Murrell, , James I. Mullins

The paper analyzes HIV breakthrough virus populations in antibody-mediated prevention trials, finding high rates of multilineage infections and recombination under VRC01 treatment.

Nature Communications · Apr 3, 2026Peer-reviewedMolecular Biology