Author

I. F. Farag

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Research Focus:chromatin & epigenetic regulation· 2 Approach:statistical model· 2 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Approach:genetic perturbation / CRISPR· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

J. F. Banfield· 3 shared R. Keren· 3 shared A. L. Jaffe· 2 shared C. He· 2 shared J. A. Doudna· 2 shared J. H. Cate· 2 shared K. Bouma-Gregson· 2 shared R. Sachdeva· 2 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersMicrobiology

J. F. Banfield

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Author profile →

4 papers

Recent·Most cited

Patterns of gene content and co-occurrence constrain the evolutionary path toward animal association in CPR bacteria

A. L. Jaffe, C. He, R. Keren, L. E. Valentin-Alvarado, P. L. Munk, K. Bouma-Gregson, I. F. Farag, Y. Amano, R. Sachdeva, P. T. West, J. F. Banfield

This study examines gene content and co-occurrence patterns in CPR bacteria to understand their evolutionary transitions between environmental and animal-associated habitats.

bioRxiv · Mar 3, 2021Microbiology

Huge and variable diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems

C. Y. He, R. Keren, M. Whittaker, I. F. Farag, J. A. Doudna, J. H. Cate, J. F. Banfield

The paper characterizes CPR bacteria and DPANN archaea in groundwater ecosystems, finding high diversity and site-specific variation, with potential health implications.

bioRxiv · May 14, 2020 · PreprintMicrobiology

Genomic expansion of archaeal lineages resolved from deep Costa Rica sediments

I. F. Farag, J. Biddle, R. Zhao, A. Martino, C. House, R. Leon-Zayas

This study identifies and analyzes new archaeal lineages from deep Costa Rica sediments, revealing novel metabolic capabilities and potential ecological interactions.

bioRxiv · Sep 9, 2019 · PreprintMicrobiology

Clades of huge phage from across Earth’s ecosystems

B. Al-Shayeb, R. Sachdeva, L.-X. Chen, F. Ward, P. Munk, A. Devoto, C. J. Castelle, M. R. Olm, K. Bouma-Gregson, Y. Amano, C. He, R. Meheust, B. Brooks, A. Thomas, A. Lavy, , J. F. Banfield

The paper identifies major clades of large phage genomes across diverse ecosystems and highlights their expanded genetic repertoires and potential functional roles.

bioRxiv · Mar 11, 2019Microbiology