Author

Ibrahim Halil Kavakli

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Angel Pizarro· 1 shared Gregory R Grant· 1 shared Hannah Dueck· 1 shared John B Hogenesch· 1 shared Junhyong Kim· 1 shared Katharina Hayer· 1 shared Michael B Black· 1 shared Nicholas F Lahens· 1 shared

Activity by Year

2014-2014 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Angel Pizarro

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1 paper

Recent·Most cited

IVT-seq reveals extreme bias in RNA-sequencing

Nicholas F Lahens, Ibrahim Halil Kavakli, Ray Zhang, Katharina Hayer, Michael B Black, Hannah Dueck, Angel Pizarro, Junhyong Kim, Rafael A Irizarry, Russell S Thomas, Gregory R Grant, John B Hogenesch

IVT-seq identifies significant technical biases in RNA-seq library preparation and sequencing, revealing coverage inconsistencies and rRNA depletion as major contributors.

Genome Biology · Jun 30, 2014Peer-reviewedGenomics