Author

Indira R. Sivaraj

Beckman Research Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:protein folding & dynamics· 1 Assay:protein structure· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Andréi S. RodiniD· 2 shared Elizaveta MukhalevaiD· 2 shared Nagarajan VaidehiiD· 2 shared Ning MaiD· 2 shared Sergio BranciamoreiD· 2 shared Wenyuan WeiiD· 2 shared Babgen ManookianiD· 1 shared Grigoriy GogoshiniD· 1 shared

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2025-2025 · peak 2/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersBiophysics

Andréi S. RodinORCID

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2 papers

Recent·Most cited

BiophysicsbioRxivPreprintJun 27, 2025

Protein Frustration Reveals Active Sites in Co-Evolved GPCR:G Protein Complexes and in Engineered Targeted Degrader Complexes

Wenyuan Wei, Roland Del Mundo, Tianyi Yang…·Nagarajan Vaidehi

The paper identifies frustrated residues in GPCR:G protein interfaces and engineered degrader complexes, showing higher frustration in engineered interfaces.

2 citations

protein structurestatistical model

𝕏 PostBluesky

BioinformaticsJournal of Chemical Information and ModelingPeer-reviewedJan 23, 2025

BaNDyT: Bayesian Network modeling of molecular Dynamics Trajectories

Elizaveta Mukhaleva, Babgen Manookian, Hanyu Chen…·Sergio Branciamore

BaNDyT uses Bayesian network modeling to analyze molecular dynamics trajectories, providing data-driven insights into protein function and interactions.

8 citations

statistical modelsoftware / tool

𝕏 PostBluesky