Author

J. C. Rink

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Bioengineering· 1 Cell Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:plant (other)· 3 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

M. Ivankovic· 2 shared A. Fire· 1 shared A. Grosbusch· 1 shared A. Rozanski· 1 shared A. Sanchez Alvarado· 1 shared A. Shevchenko· 1 shared A. Thommen· 1 shared B. Egger· 1 shared

Activity by Year

2018-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersEvolutionary Biology

M. Ivankovic

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Probing the evolutionary dynamics of whole-body regeneration within planarian flatworms

M. Vila-Farre, A. Rozanski, M. Ivankovic, J. Cleland, J. N. Brand, F. Thalen, M. Grohme, S. von Kannen, A. Grosbusch, H. T.-K. Vu, C. E. Prieto, F. Carbayo, B. Egger, C. Bleidorn, J. E. J. Rasko, J. C. Rink

This study investigates the evolutionary dynamics of regeneration in planarians by analyzing regeneration abilities and transcriptomes across species, revealing multiple transitions and a potential trade-off involving Wnt signaling and reproduction.

bioRxiv · Dec 19, 2022 · PreprintEvolutionary Biology

Content-aware image restoration improves spatiotemporal resolution in luminescence microscopy.

T. Boothe, M. Ivankovic, M. A. Grohme, J. C. Rink

This paper shows that content-aware image restoration reduces exposure time in luminescence microscopy, improving temporal resolution.

bioRxiv · Apr 29, 2022 · PreprintCell Biology

Long-range morphogen gradient formation by cell-to-cell signal propagation

J. E. M. Dickmann, J. C. Rink, F. Jülicher

The paper shows that cell-to-cell signaling relays can generate long-range morphogen gradients without relying on extreme diffusion or degradation rates.

bioRxiv · Apr 11, 2022Biophysics

Heterologous reporter expression in the planarian Schmidtea mediterranea through somatic mRNA transfection

R. N. Hall, U. Weill, L. Drees, S. Leal-Ortiz, H. Li, C. Chai, A. Sanchez Alvarado, N. A. Melosh, A. Fire, J. C. Rink, B. Wang

This paper demonstrates heterologous protein expression in planarians using mRNA transfection, improving reporter expression through UTR optimization and codon bias.

bioRxiv · Apr 20, 2021Bioengineering

Body size-dependent energy storage causes Kleiber’s law scaling of the metabolic rate in planarians

A. Thommen, S. Werner, O. Frank, J. Philipp, O. Knittelfelder, Y. Quek, K. Fahmy, A. Shevchenko, B. M. Friedrich, F. Julicher, J. C. Rink

This study shows Kleiber’s law in planarians arises from size-dependent energy storage, not cellular metabolic rate changes.

bioRxiv · May 30, 2018Biophysics