Author

J. Chuong

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:yeast· 2 Approach:Bayesian inference· 1 Approach:deep learning· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

D. Gresham· 2 shared G. Avecilla· 2 shared Y. Ram· 2 shared F. Abdul-Rahman· 1 shared F. Li· 1 shared G. J. Sherlock· 1 shared I. Suresh· 1 shared J. Matthews· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersEvolutionary Biology

D. Gresham

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Template switching during DNA replication is a prevalent source of adaptive gene amplification

J. Chuong, N. Ben Nun, I. Suresh, J. Matthews, T. De, G. Avecilla, F. Abdul-Rahman, N. Brandt, Y. Ram, D. Gresham

The paper investigates how genomic architecture influences the formation and fitness of adaptive copy number variants (CNVs) in yeast, finding that template switching during DNA replication is a common mechanism for CNV generation.

bioRxiv · May 3, 2024Evolutionary Biology

Simulation-based inference of evolutionary parameters from adaptation dynamics using neural networks

G. Avecilla, J. Chuong, F. Li, G. J. Sherlock, D. Gresham, Y. Ram

The paper estimates beneficial mutation rates and fitness effects using simulation-based Bayesian inference on CNV dynamics in yeast.

bioRxiv · Sep 30, 2021 · PreprintEvolutionary Biology