Author

J. K. Parker

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

B. W. Davies· 2 shared A. V. Kulikova· 1 shared C. O. Wilke· 1 shared D. J. Leahy· 1 shared M. Gonzalez-Magaldi· 1 shared M. S. Telford· 1 shared S.-Y. Kim· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersMicrobiology

B. W. Davies

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2 papers

Recent·Most cited

Semantic search using protein large language models detects class II microcins in bacterial genomes

A. V. Kulikova, J. K. Parker, B. W. Davies, C. O. Wilke

The paper uses protein large language models to detect class II microcins in bacterial genomes, finding embeddings outperform sequence-based methods like BLAST in identifying known and novel microcins.

mSystems · Oct 22, 2024Peer-reviewedMicrobiology

Export of diverse and bioactive peptides through a type I secretion system.

S.-Y. Kim, J. K. Parker, M. Gonzalez-Magaldi, M. S. Telford, D. J. Leahy, B. W. Davies

This study shows the microcin V type I secretion system can export a wide range of peptides, limited only by length, and functions in multiple Gram-negative bacteria.

bioRxiv · Jan 26, 2023 · PreprintMicrobiology