Author

J. M. Archibald

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Microbiology· 1

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Research Focus:gene regulatory network inference· 4 Approach:statistical model· 4 Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 2 Research Focus:chromatin & epigenetic regulation· 2 Approach:comparative / phylogenetic analysis· 2 Assay:whole-genome sequencing· 2 Research Focus:cell-cell communication· 1

Frequent Co-Authors

A. J. Roger· 3 shared S. de Vries· 3 shared B. A. Curtis· 2 shared D. E. Salas-Leiva· 2 shared H. Buschmann· 2 shared I. Irisarri· 2 shared J. de Vries· 2 shared K. von Schwartzenberg· 2 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersEvolutionary Biology

A. J. Roger

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Author profile →

5 papers

Recent·Most cited

A unique symbiosome in an anaerobic single-celled eukaryote

J. Jerlström-Hultqvist, L. Gallot-Lavallee, D. E. Salas-Leiva, B. A. Curtis, K. Zahonova, I. Cepicka, C. W. Stairs, S. Pipaliya, J. B. Dacks, J. M. Archibald, A. J. Roger

The paper identifies a unique symbiosome in Anaeramoeba, showing a structured syntrophic relationship with sulfate-reducing bacterial ectosymbionts through genomic and transcriptomic analyses.

bioRxiv · Mar 3, 2023Evolutionary Biology

Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution

X. Feng, J. Zheng, I. Irisarri, H. Yu, B. Zheng, Z. Ali, S. de Vries, J. Keller, J. M. Fuerst-Jansen, A. Dadras, J. M. Zegers, T. P. Rieseberg, A. Dhabalia Ashok, T. Darienko, M. J. Bierenbroodspot, , A. Mosquna

The paper sequenced four Zygnematophyceae algal genomes to study signaling network evolution, finding expanded genes for multicellularity and environmental response.

bioRxiv · Jan 31, 2023Evolutionary Biology

A phylogenomically informed five-order system for the closest relatives of land plants

S. Hess, S. K. Williams, A. Busch, I. Irisarri, C. F. Delwiche, S. de Vries, T. Darienko, A. J. Roger, J. M. Archibald, H. Buschmann, K. von Schwartzenberg, J. de Vries

The paper presents a new five-order system for Zygnematophyceae based on phylogenomic analysis of a filamentous green alga, revealing five independent origins of filamentous growth.

bioRxiv · Jul 6, 2022Evolutionary Biology

A free-living protist that lacks canonical eukaryotic DNA replication and segregation systems

D. E. Salas-Leiva, E. C. Tromer, B. A. Curtis, J. Jerlstrom-Hultqvist, M. Kolisko, Z. Yi, J. S. Salas-Leiva, L. Gallot-Lavallee, G. J. P. L. Kops, J. M. Archibald, A. G. B. Simpson, A. J. Roger

This study identifies a free-living protist, Carpediemonas membranifera, that lacks canonical eukaryotic DNA replication and segregation systems, suggesting novel mechanisms for these processes.

bioRxiv · Mar 14, 2021Evolutionary Biology

Comparative analyses of saprotrophy in Salisapilia sapeloensis and diverse plant pathogenic oomycetes reveal lifestyle-specific gene expression

S. de Vries, J. de Vries, J. M. Archibald, C. H. Slamovits

This study compares gene expression between saprotrophic oomycete Salisapilia sapeloensis and plant pathogenic oomycetes to identify lifestyle-specific regulatory patterns.

bioRxiv · May 31, 2019Microbiology