Author

J. M. Vaz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 3

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

M. K. Jolly· 3 shared M. Sehgal· 2 shared A.-M. Dragoi· 1 shared C. Abshire· 1 shared H. Levine· 1 shared J. A. Somarelli· 1 shared M. Catalanotto· 1 shared M. Chu· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersCancer Biology

M. K. Jolly

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3 papers

Recent·Most cited

Characterizing heterogeneity along EMT and metabolic axes in colorectal cancer reveals underlying consensus molecular subtype-specific trends

M. Sehgal, S. R, J. M. Vaz, Y. Raja G, S. Muralidharan, S. Venkatraghavan, M. K. Jolly

The paper analyzes CRC subtypes to show how EMT and metabolic axes vary across CMS subtypes, revealing subtype-specific metabolic and mesenchymal correlations.

bioRxiv · Aug 6, 2023Cancer Biology

Dual role of CASP8AP2/FLASH in regulating epithelial-to-mesenchymal (EMT) plasticity

M. Catalanotto, J. M. Vaz, C. Abshire, R. Youngblood, M. Chu, H. Levine, M. K. Jolly, A.-M. Dragoi

This study identifies FLASH as a regulator of EMT plasticity, showing it influences hybrid E/M states through its effects on EMT-TFs and cell junction proteins.

bioRxiv · Mar 12, 2023 · PreprintCancer Biology

Partial EMT and associated changes in cellular plasticity in oncovirus-positive samples

M. Sehgal, R. Ray, J. M. Vaz, S. Kanikar, J. A. Somarelli, M. K. Jolly

The paper analyzes transcriptomics data to identify common gene regulatory features in oncovirus-positive samples, revealing partial EMT and metabolic changes linked to immune checkpoint molecules.

bioRxiv · Aug 20, 2022Cancer Biology