Author

J. R. Penades

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 4 Approach:experimental assay· 3 Research Focus:chromatin & epigenetic regulation· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Fillol-Salom· 2 shared E. P. C. Rocha· 2 shared A. F. Haag· 1 shared A. H. Azam· 1 shared B. A. Wee· 1 shared B. Cui· 1 shared E. J. Richardson· 1 shared F.-Y. Li· 1 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersMicrobiology

A. Fillol-Salom

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Author profile →

4 papers

Recent·Most cited

Identification and characterization of thousands of bacteriophage satellites across bacteria

J. M. de Sousa, A. Fillol-Salom, J. R. Penades, E. P. C. Rocha

The paper develops a tool to identify bacteriophage satellites in bacterial genomes, expanding their known number to ~5000 and revealing their diversity and genomic organization.

bioRxiv · Sep 14, 2022Microbiology

A widespread family of phage-inducible chromosomal islands only steals bacteriophage tails to spread in nature

N. Alqurainy, L. Miguel-Romero, J. Moura de Sousa, J. Chen, E. P. C. Rocha, A. Fillol-Salom, J. R. Penades

The paper identifies a new family of phage-inducible chromosomal islands that produce small capsids using phage tails and spread without harming their helper phages.

bioRxiv · Sep 8, 2022Microbiology

Massive genome decay and expansion of insertion sequences drive the evolution of a novel host-restricted bacterial pathogen

G. Yebra, A. F. Haag, M. N. Neamah, B. A. Wee, E. J. Richardson, P. Horcajo, S. Granneman, M. A. Tormo-Mas, R. de la Fuente, J. R. Fitzgerald, J. R. Penades

This study investigates the evolutionary history of Staphylococcus aureus subsp. anaerobius, revealing genome decay, expansion of insertion sequences, and adaptation to a host-restricted niche.

bioRxiv · Oct 13, 2020 · PreprintMicrobiology

Development of CRISPR-Cas13a-based antimicrobials capable of sequence-specific killing of target bacteria

K. Kiga, X.-E. Tan, R. Ibarra-Chavez, S. Watanabe, Y. Aiba, Y. Sato, F.-Y. Li, T. Sasahara, B. Cui, M. Kawauchi, T. Boonsiri, K. Thitiananpakorn, Y. Taki, A. H. Azam, M. Suzuki, , L. Cui

This study develops CRISPR-Cas13a-based antimicrobials that kill target bacteria by cleaving RNA, showing effectiveness against carbapenem-resistant E. coli and methicillin-resistant S. aureus.

bioRxiv · Nov 18, 2019Microbiology