Author

J. T. Cuperus

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 4 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Organism:Arabidopsis· 3 Research Focus:cell type annotation· 2 Research Focus:development & morphogenesis· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1

Frequent Co-Authors

C. Queitsch· 5 shared K. L. Bubb· 3 shared C. M. Alexandre· 2 shared J. Tonnies· 2 shared S. Fields· 2 shared T. Jores· 2 shared B. D. Ryder· 1 shared B. Huang· 1 shared

Activity by Year

2020-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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5 shared papersPlant Biology

C. Queitsch

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Author profile →

5 papers

Recent·Most cited

De novo designed Hsp70 activator dissolves intracellular condensates

J. Z. Zhang, N. Greenwood, J. Hernandez, J. T. Cuperus, B. Huang, B. D. Ryder, C. Queitsch, J. E. Gestwicki, D. Baker

The paper designs Hsp70 activators that dissolve intracellular condensates by modulating Hsp70 ATPase activity and promoting protein refolding.

bioRxiv · Sep 18, 2023 · PreprintBiochemistry

Arabidopsis and Maize Terminator Strength is Determined by GC Content, Polyadenylation Motifs and Cleavage Probability

S. Gorjifard, T. Jores, J. Tonnies, N. A. Mueth, K. L. Bubb, T. Wrightsman, E. S. Buckler, S. Fields, J. T. Cuperus, C. Queitsch

The paper measures terminator activity in Arabidopsis and maize using Plant STARR-seq, identifies factors influencing strength, and develops a predictive model for synthetic terminators.

bioRxiv · Jun 16, 2023 · PreprintPlant Biology

LTP2 hypomorphs show genotype-by-environment interaction in early seedling traits in Arabidopsis thaliana

C. M. Alexandre, K. L. Bubb, K. M. Schultz, J. Lempe, J. T. Cuperus, C. Queitsch

The paper shows that LTP2 hypomorphs in Arabidopsis thaliana exhibit increased phenotypic variation in early seedling traits, which is influenced by environmental conditions and compensated by LTP1 expression.

bioRxiv · May 11, 2023 · PreprintPlant Biology

AGO1 and HSP90 buffer different genetic variants in Arabidopsis thaliana

T. Lemus, G. A. Mason, K. L. Bubb, C. M. Alexandre, C. Queitsch, J. T. Cuperus

The paper investigates how AGO1 and HSP90 buffer genetic variation in Arabidopsis thaliana, finding that they act on different loci despite affecting similar traits.

bioRxiv · Jun 27, 2022Plant Biology

Identification of plant enhancers and their constituent elements by STARR-seq in tobacco leaves

T. Jores, J. Tonnies, M. W. Dorrity, J. T. Cuperus, S. Fields, C. Queitsch

The paper develops a high-throughput assay in transiently transformed tobacco leaves to identify enhancers, characterize their functional elements, and detect condition-specific enhancer activity.

bioRxiv · Feb 17, 2020Plant Biology