Author

James A. McKinnell

Los Angeles County Department of Public Health

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:Bayesian inference· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Georgia LagoudasiD· 1 shared Loren Gregory MilleriD· 1 shared Marko Järvenpää· 1 shared Mohamad SateriD· 1 shared Paul C. BlaineyiD· 1 shared Pekka MarttineniD· 1 shared Susan S. HuangiD· 1 shared Yonatan H. GradiD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Georgia LagoudasORCID

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1 paper

Recent·Most cited

A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation

Marko Järvenpää, Mohamad Sater, Georgia Lagoudas, Paul C. Blainey, Loren Gregory Miller, James A. McKinnell, Susan S. Huang, Yonatan H. Grad, Pekka Marttinen

The paper presents a Bayesian model to estimate bacterial acquisition and clearance rates by accounting for within-host genetic variation and sampling intervals, validated using simulations and applied to MRSA isolates.

PLoS Computational Biology · Apr 22, 2019Peer-reviewedBioinformatics