Author

Jiahao Ni

Ocean University of China

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:chicken / avian· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Michael LynchiD· 3 shared Farhan AliiD· 2 shared John P. DeLongiD· 2 shared Kenji NanbaiD· 2 shared Kristi L. MontoothiD· 2 shared Lydia J. BrightiD· 2 shared Masahiro FujishimaiD· 2 shared Ravina S Telkar· 2 shared

Activity by Year

2023-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Michael LynchORCID

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Author profile →

3 papers

Recent·Most cited

Shifts in the population-genetic landscape of the ciliate genus Paramecium

Farhan Ali, Ravina S Telkar, Samuel F. Miller, Jiahao Ni, Lydia J. Bright, John P. DeLong, Kristi L. Montooth, Sascha Krenek, Masahiro Fujishima, Kenji Nanba, Michael Lynch

This study sequenced genomes of hundreds of Paramecium isolates worldwide to investigate population-genetic patterns, finding geographic differentiation and speciation driven by genetic isolation.

bioRxiv · May 29, 2026 · PreprintEvolutionary Biology

Evolutionary Dynamics of Paramecium Mitochondrial Genomes

Ravina S Telkar, Farhan Ali, Samuel F. Miller, Jiahao Ni, Lydia J. Bright, John P. DeLong, Kristi L. Montooth, Sascha Krenek, Masahiro Fujishima, Kenji Nanba, Michael Lynch

This study analyzes mitochondrial genomes of Paramecium to explore evolutionary dynamics, revealing cryptic diversity, conserved genes, and patterns of molecular evolution.

bioRxiv · May 29, 2026 · PreprintGenomics

One-Step PCR Amplicon Library Construction (OSPALC, version 1)

Jiahao Ni, Jiao Pan, Yaohai Wang, Tianhao Chen, Xinshi Feng, Yichen Li, Tongtong Lin, Michael Lynch, Hongan Long, Weiyi Li

OSPALC provides a one-step PCR method for amplicon library construction, reducing cost and time compared to commercial kits, and includes a QIIME2 analysis pipeline.

Marine Life Science & Technology · Aug 4, 2023Peer-reviewedGenomics