Author

Jiayi Duan

University of Pennsylvania

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Assay:metagenomics· 1

Frequent Co-Authors

Aaron T. TimpermaniD· 1 shared Ahmed M Moustafa· 1 shared Andrew D. MarquesiD· 1 shared Elizabeth Aine Fitts· 1 shared Frederic D. BushmaniD· 1 shared Haeun Karissa Lim· 1 shared Kyle L. BittingeriD· 1 shared Matthew HogenaueriD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperMicrobiology

Aaron T. TimpermanORCID

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1 paper

Recent·Most cited

Optimizing methods for virome analysis based on studies of a synthetic viral community

Jiayi Duan, Andrew D. Marques, Matthew Hogenauer, Young Hwang, Yanjia Zhang, Aaron T. Timperman, Stephanie Higgins, Naomi G. Wilson, Elizabeth Aine Fitts, Haeun Karissa Lim, Kyle L. Bittinger, Ahmed M Moustafa, Ronald G. Collman, Frederic D. Bushman

This paper evaluates virome analysis methods using a synthetic viral community, finding that VLP enrichment improves read yields and longer sequencing cycles enhance genome assembly.

mSystems · Jun 2, 2026Peer-reviewedMicrobiology