Author

Jichen Wang

McGill University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Arsham Mikaeili NaminiiD· 2 shared Hamed Shateri NajafabadiiD· 2 shared Hani GoodarziiD· 2 shared Aiden Sababi· 1 shared Albertas NavickasiD· 1 shared Aldo Hernández-CorchadoiD· 1 shared Ali Poursina· 1 shared Ali Saberi· 1 shared

Activity by Year

2024-2026 · peak 1/yr

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10 top collaborators · 35 mutual co-author links

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2 shared papersGenomics

Arsham Mikaeili NaminiORCID

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2 papers

Recent·Most cited

Recursive mutational robustness in cancer through intra- and inter-genic compensation

Rohan Dandage, Aldo Hernández-Corchado, Ariel Madrigal, Arsham Mikaeili Namini, Jichen Wang, Bong Gun Choi, Hani Goodarzi, Hamed Shateri Najafabadi

The paper identifies intra-genic mutational robustness through alternative splicing in cancer, showing it can complement inter-genic robustness and is associated with worse disease outcomes.

bioRxiv · May 28, 2026 · PreprintGenomics

Accurate isoform quantification in bulk and single-cell RNA-seq by integrating multi-platform sequencing data and sequence-to-expression models

Michael J. Apostolides, Jichen Wang, Ali Saberi, Benedict Choi, Tabea Mittmann, Ali Poursina, Arsham Mikaeili Namini, Darian Salehi, Gabrielle Perron, Albertas Navickas, Larisa M. Soto, Aiden Sababi, Hani Goodarzi, Hamed Shateri Najafabadi

This paper introduces MPAQT, a framework that improves isoform quantification in bulk and single-cell RNA-seq by integrating short- and long-read data and using sequence-to-expression models.

bioRxiv · Jul 11, 2024 · PreprintBioinformatics