Author

Jonathan Cogan

Johannes Gutenberg University Mainz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Alejandro ChacóniD· 1 shared Alexander Nesterovskiy· 1 shared Anthony B. CostaiD· 1 shared Arash VahdatiD· 1 shared Bertil SchmidtiD· 1 shared Boris Fomitchev· 1 shared Christian DallagoiD· 1 shared Fabian BerressemiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alejandro ChacónORCID

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1 paper

Recent·Most cited

Efficient protein structure prediction fromcompact computers to datacenters withOpenFold-TRT

Kieran Didi, Prashant Sohani, Fabian Berressem, Alexander Nesterovskiy, Boris Fomitchev, Robert Ohannessian, Mohamed Elbalkini, Jonathan Cogan, Anthony B. Costa, Arash Vahdat, Felix Kallenborn, Bertil Schmidt, Milot Mirdita, Martin Steinegger, Christian Dallago, Alejandro Chacón

The paper accelerates protein structure prediction using OpenFold with TensorRT and MMseqs2-GPU, achieving 131x faster inference than AlphaFold2 on specific hardware.

bioRxiv · Mar 15, 2026 · PreprintBioinformatics