Author

K. Duffy

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:cell-cell communication· 1 Organism:fungi (other)· 1

Frequent Co-Authors

C. Lo Celso· 2 shared A. Blagborough· 1 shared A. Lipien· 1 shared B. Gottgens· 1 shared C. Brunsdon· 1 shared C. Liu· 1 shared F. Tissot· 1 shared G. Adams· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersCell Biology

C. Lo Celso

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3 papers

Recent·Most cited

High phenotypic and genotypic plasticity among strains of the mushroom-forming fungus Schizophyllum commune

I. M. Marian, I. D. Valdes, R. D. Hayes, K. LaButti, K. Duffy, M. Chovatia, J. Johnson, V. Ng, L. G. Lugones, H. A. B. Wosten, I. V. Grigoriev, R. A. Ohm

This study examines phenotypic and genotypic variation in Schizophyllum commune strains, finding high diversity in mushroom development and lignocellulose degradation, with conserved genes for these traits across genomes.

bioRxiv · Feb 21, 2024 · PreprintMicrobiology

PACESS: Practical AI-based Cell Extraction and Spatial Statistics for large 3D bone marrow tissue images

G. Adams, F. Tissot, C. Liu, C. Brunsdon, K. Duffy, C. Lo Celso

PACESS analyzes 3D bone marrow images to study spatial interactions between cell types, revealing new microenvironments influenced by leukemic cell clusters.

bioRxiv · Dec 29, 2022Cell Biology

Malaria-induced remodelling of the bone marrow microenvironment mediates loss of haematopoietic stem cell function

M. L. Haltalli, S. Watcham, N. K. Wilson, K. Eilers, A. Lipien, M. L. Vainieri, N. Ruivo, H. Ang, R. E. Sinden, K. Duffy, B. Gottgens, A. Blagborough, C. Lo Celso

This study investigates how malaria infection alters the bone marrow microenvironment, leading to impaired haematopoietic stem cell function through changes in endothelium and osteoblasts.

bioRxiv · Nov 22, 2018 · PreprintCell Biology