Author

M. Chovatia

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:fungi (other)· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Organism:C. elegans· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

I. V. Grigoriev· 3 shared K. LaButti· 2 shared A. Lipzen· 1 shared A. Salamov· 1 shared A. Sharma· 1 shared B. Balint· 1 shared B. Henrissat· 1 shared B. Kiss· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersEvolutionary Biology

I. V. Grigoriev

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Author profile →

4 papers

Recent·Most cited

High phenotypic and genotypic plasticity among strains of the mushroom-forming fungus Schizophyllum commune

I. M. Marian, I. D. Valdes, R. D. Hayes, K. LaButti, K. Duffy, M. Chovatia, J. Johnson, V. Ng, L. G. Lugones, H. A. B. Wosten, I. V. Grigoriev, R. A. Ohm

This study examines phenotypic and genotypic variation in Schizophyllum commune strains, finding high diversity in mushroom development and lignocellulose degradation, with conserved genes for these traits across genomes.

bioRxiv · Feb 21, 2024 · PreprintMicrobiology

Discovery of photosynthesis genes through whole-genome sequencing of acetate-requiring mutants of Chlamydomonas reinhardtii

S. Wakao, P. M. Shih, K. Guan, W. Schackwitz, J. Ye, R. Shih, M. Chovatia, A. Sharma, J. Martin, C.-L. Wei, K. K. Niyogi

The paper sequenced genomes of photosynthesis mutants in Chlamydomonas reinhardtii to identify candidate genes involved in photosynthesis, validating two essential genes and uncovering 273 high-confidence candidates.

bioRxiv · Feb 17, 2021Plant Biology

Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi

Y. Chang, D. Rochon, S. Sekimoto, Y. Wang, M. Chovatia, L. Sandor, A. Salamov, I. V. Grigoriev, J. E. Stajich, J. W. Spatafora

The paper uses genome and transcriptome data from Olpidium to analyze its phylogenetic position relative to non-flagellated terrestrial fungi, finding it as the closest zoosporic relative.

bioRxiv · Sep 16, 2020Evolutionary Biology

The genome of Auriculariopsis ampla sheds light on fruiting body development and wood-decay of bark-inhabiting fungi

E. Almasi, N. Sahu, K. Krizsan, B. Balint, G. M. Kovacs, B. Kiss, J. Cseklye, E. Drula, B. Henrissat, I. Nagy, M. Chovatia, C. Adam, K. LaButti, A. Lipzen, R. Riley, , L. G. Nagy

This study sequenced the genome of Auriculariopsis ampla and analyzed its transcriptome to uncover genetic features related to wood-decay and fruiting body development in fungi.

bioRxiv · Feb 14, 2019 · PreprintEvolutionary Biology