Author

K. Rudi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Assay:metagenomics· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:host-pathogen & immune response· 1 Organism:mouse· 1

Frequent Co-Authors

A. L. Agrinier· 1 shared A. Marette· 1 shared A. R. A. Verissimo· 1 shared A. Rivollier· 1 shared A. V.-P. de Leon· 1 shared B. A. H. Jensen· 1 shared B. Weston· 1 shared C. G. Clausen· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperImmunology

A. L. Agrinier

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

The Salmon Microbial Genome Atlas enables novel insights into bacteria-host interactions via functional mapping

A. V.-P. de Leon, M. Hoetzinger, T. Hensen, S. Gupta, B. Weston, S. M. Johnsen, J. A. Rasmussen, C. G. Clausen, L. Pless, A. R. A. Verissimo, K. Rudi, L. G. Snipen, C. R. Karlsen, M. T. Limborg, S. Bertilsson, , S. L. La Rosa

The paper presents the Salmon Microbial Genome Atlas, a collection of bacterial genomes from Atlantic salmon, and functionally characterizes key gut microbiota populations involved in nutrient processing and health.

bioRxiv · Dec 10, 2023 · PreprintMicrobiology

HumGut: A comprehensive Human Gut prokaryotic genomes collection filtered by metagenome data

P. Hiseni, K. Rudi, R. C. Wilson, F. T. Hegge, L. Snipen

The paper creates a comprehensive human gut prokaryotic genome collection, HumGut, which outperforms existing databases in metagenomic read classification.

bioRxiv · Mar 25, 2020Microbiology

Lysates of Methylococcus capsulatus Bath induce a lean-like microbiota, intestinal FoxP3+RORγt+IL-17+ Tregs and improve metabolism

B. A. H. Jensen, J. B. Holm, I. S. Larsen, N. v. Burg, S. Derer, A. Rivollier, A. L. Agrinier, K. Sulek, S. A. Indrelid, Y. J. Arnoldussen, S. B. Sonne, E. Fjaere, M. T. F. Damgaard, S. I. Paerregaard, I. L. Angell, , T. Lea

McB lysates alter gut microbiota to a lean-like state, increase FoxP3+RORγt+IL-17+ Tregs, and improve metabolic health in mice.

bioRxiv · Nov 26, 2019Immunology