Author

Kathryn Beal

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Javier Herrero· 3 shared Aaron E. Darling· 1 shared Alexander Poliakov· 1 shared Bee Ling NgiD· 1 shared Beiyuan FuiD· 1 shared Benedict PateniD· 1 shared Benjamin M SkinneriD· 1 shared Brian Raney· 1 shared

Activity by Year

2014-2015 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersBioinformatics

Javier Herrero

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Author profile →

3 papers

Recent·Most cited

The pig X and Y chromosomes: structure, sequence and evolution

Benjamin M Skinner, Carole A Sargent, Carol Churcher, Toby Hunt, Javier Herrero, Jane Loveland, Matt Dunn, Sandra Louzada, Beiyuan Fu, William Chow, James Gilbert, Siobhan Austin-Guest, Kathryn Beal, Denise Carvalho-Silva, William Cheng, , Chris Tyler-Smith

This paper presents improved assemblies and gene annotations for the pig X and Y chromosomes, revealing evolutionary mechanisms and gene content differences compared to other mammals.

Genome Research · Nov 11, 2015Peer-reviewedGenomics

Genome-wide comparative analysis reveals human- mouse regulatory landscape and evolution

Olgert Denas, Richard Sandstrom, Yong Cheng, Kathryn Beal, Javier Herrero, Ross Hardison, James Taylor

The paper compares regulatory sequences between human and mouse to show how regulatory elements are conserved, repurposed, and exapted across species.

bioRxiv · Oct 30, 2014Bioinformatics

Alignathon: A competitive assessment of whole genome alignment methods.

Dent Earl, Ngan K Nguyen, Glenn Hickey, Robert S. Harris, Stephen Fitzgerald, Kathryn Beal, Igor Seledtsov, Vladimir Molodtsov, Brian Raney, Hiram Clawson, Jaebum Kim, Carsten Kemena, Jia-Ming Chang, Ionas Erb, Alexander Poliakov, , Benedict Paten

The paper organizes a competitive evaluation of whole genome alignment methods using simulated and real datasets, finding significant accuracy differences between tools and performance variations across evolutionary distances.

Genome Research · Oct 1, 2014Peer-reviewedBioinformatics