Author

Laura Thomson

University of Oxford

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Christophe FraseriD· 2 shared David BonsalliD· 2 shared George MacIntyre-Cockett· 2 shared Katrina LythgoeiD· 2 shared Luca Ferretti AiD· 2 shared Matthew D. HalliD· 2 shared Tanya GolubchikiD· 2 shared Amy TrebesiD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Christophe FraserORCID

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2 papers

Recent·Most cited

Directional predictions of HIV transmission with optimised genomics in cohorts of serodiscordant couples

Lele Zhao, Matthew D. Hall, Chris Wymant, Lucie Abeler‐Dörner, Newton Otieno Otecko, George MacIntyre-Cockett, Sandra E Chaudron, Laura Thomson, Tanya Golubchik, Jairam R. Lingappa, Luca Ferretti A, Katrina Lythgoe, Christophe Fraser, Joshua T. Herbeck, David Bonsall

The paper evaluates two tools for HIV transmission direction prediction using short and long-read sequencing data from serodiscordant couples, showing long reads improve phylogenetic resolution and transmission prediction accuracy.

bioRxiv · Oct 19, 2023 · PreprintGenomics

Viral burdens are associated with age and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection related sampling bias.

Helen R. Fryer, Tanya Golubchik, Matthew D. Hall, Christophe Fraser, Robert Hinch, Luca Ferretti A, Laura Thomson, Anel Nurtay, Lorenzo Pellis, George MacIntyre-Cockett, Amy Trebes, David Buck, Paolo Piazza, Angela Green, Lorne J. Lonie, , Katrina Lythgoe

This study adjusts for sampling bias in SARS-CoV-2 Ct values and finds that viral variant and age affect within-host viral burdens, with variant effects varying by vaccination status.

bioRxiv · Dec 2, 2022 · PreprintGenetics