Author
Centre for Human Genetics
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
5 papers
Recent·Most cited
Lele Zhao, Matthew D. Hall, Chris Wymant…·David Bonsall
The paper evaluates two tools for HIV transmission direction prediction using short and long-read sequencing data from serodiscordant couples, showing long reads improve phylogenetic resolution and transmission prediction accuracy.
Sheila Lumley, Daisy L. Jennings, Elizabeth Waddilove…·Philippa Clare Matthews
This paper introduces a pan-genotypic probe-based enrichment method to enhance HBV sequencing efficiency, showing significant increases in HBV read counts and viral load correlation.
Helen R. Fryer, Tanya Golubchik, Matthew D. Hall…·Katrina Lythgoe
This study adjusts for sampling bias in SARS-CoV-2 Ct values and finds that viral variant and age affect within-host viral burdens, with variant effects varying by vaccination status.
Katrina Lythgoe, Matthew D. Hall, Luca Ferretti A…·Tanya Golubchik
This study analyzes within-host SARS-CoV-2 diversity and transmission patterns using 1390 UK clinical samples, finding low within-host diversity and a narrow transmission bottleneck.
David Bonsall, Tanya Golubchik, Mariateresa de Cesare…·Christophe Fraser
This paper introduces veSEQ-HIV, a cost-effective, high-throughput sequencing method for HIV that recovers complete genomes and quantifies viral load, enabling drug resistance monitoring and transmission analysis.