Author

Lorne J. Lonie

Centre for Human Genetics

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genetics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

David BuckiD· 2 shared Alistair T. PagnamentaiD· 1 shared Amy TrebesiD· 1 shared Andrew NelsoniD· 1 shared Anel NurtayiD· 1 shared Angela GreeniD· 1 shared Anna SchuhiD· 1 shared Christophe FraseriD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersGenetics

David BuckORCID

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2 papers

Recent·Most cited

Viral burdens are associated with age and viral variant in a population-representative study of SARS-CoV-2 that accounts for time-since-infection related sampling bias.

Helen R. Fryer, Tanya Golubchik, Matthew D. Hall, Christophe Fraser, Robert Hinch, Luca Ferretti A, Laura Thomson, Anel Nurtay, Lorenzo Pellis, George MacIntyre-Cockett, Amy Trebes, David Buck, Paolo Piazza, Angela Green, Lorne J. Lonie, , Katrina Lythgoe

This study adjusts for sampling bias in SARS-CoV-2 Ct values and finds that viral variant and age affect within-host viral burdens, with variant effects varying by vaccination status.

bioRxiv · Dec 2, 2022 · PreprintGenetics

Short and long-read genome sequencing methodologies for somatic variant detection; genomic analysis of a patient with diffuse large B-cell lymphoma

Hannah Roberts, Maria Lopopolo, Alistair T. Pagnamenta, Eshita Sharma, Duncan Parkes, Lorne J. Lonie, Colin Freeman, Samantha J.L. Knight, Gerton A. Lunter, Helene Marie-Pierre Dreau, Helen E. Lockstone, Jenny C. Taylor, Anna Schuh, Rory J. Bowden, David Buck

This study evaluates the ability of long-read sequencing to detect somatic variants in a lymphoma patient, highlighting the need for specialized tools and the advantages of long reads for structural variants.

Scientific Reports · Mar 19, 2021Peer-reviewedGenetics