MalKinID: A Likelihood-Based Model for Identifying Malaria Parasite Genealogical Relationships Using Identity-by-Descent
Wesley Wong, Lea Wang, Stephen F. Schaffner, Xue Li, Ian H. Cheeseman, Timothy J. C. Anderson, Ashley M. Vaughan, Michael T. Ferdig, Sarah K. Volkman, Daniel L. Hartl, Dyann F. Wirth
MalKinID identifies malaria parasite genealogical relationships using IBD proportions and segment distributions, showing high accuracy in outcrossed importations but reduced performance in inbreeding scenarios.
bioRxiv · Jul 12, 2024 · PreprintGenetics