Leonardo de Oliveira Martins

This study shows biofilms of Salmonella Typhimurium rapidly evolve resistance to antibiotics through novel mechanisms, with fitness costs associated with adaptation.

This paper introduces Guenomu, a Bayesian hierarchical model for species tree estimation from genome-wide gene tree data, accounting for gene tree/species tree disagreement.

SimPhy simulates gene, locus, and species trees under evolutionary processes like ILS, duplication, loss, and HGT, showing faster performance than existing tools.

The paper critiques a phylogenetic test for universal common ancestry by presenting counterexamples and proposes better frequentist tests.