Author

Lindsey K. Olsen

Baylor College of Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Organism:human· 2 Approach:Bayesian inference· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:diffusion model· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Bing ZhangiD· 2 shared Adam M Taylor· 1 shared Hui ZhangiD· 1 shared Jacqueline HeckenhaueriD· 1 shared John S. SprouliD· 1 shared Matthew KweskiniD· 1 shared Nengneng YuiD· 1 shared Paul B. FrandseniD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersBioinformatics

Bing ZhangORCID

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Author profile →

3 papers

Recent·Most cited

TabSyM: A Generative Pipeline for Small Multi-Cohort Omics Tabular Data

Nengneng Yu, Yuefan Wang, Lindsey K. Olsen, Bing Zhang, Hui Zhang, Zaoxing Liu

TabSyM improves predictive modeling of small, high-dimensional biomedical datasets by generating synthetic data and aligning cross-cohort distributions.

bioRxiv · Jul 14, 2025 · PreprintBioinformatics

SEPepQuant enables comprehensive protein isoform characterization in shotgun proteomics

Yongchao Dou, Xinpei Yi, Lindsey K. Olsen, Bing Zhang

SEPepQuant improves protein isoform characterization in shotgun proteomics by addressing limitations in existing methods, identifying isoform-level regulation events, and enabling cross-study comparisons.

bioRxiv · Nov 3, 2022 · PreprintBioinformatics

Draft Genome Assemblies and Annotations of Agrypnia vestita Walker, and Hesperophylaxmagnus Banks Reveal Substantial Repetitive Element Expansion in Tube Case-making Caddisflies (Insecta: Trichoptera)

Lindsey K. Olsen, Jacqueline Heckenhauer, John S. Sproul, Rebecca B. Dikow, Vanessa Liz González, Matthew Kweskin, Adam M Taylor, Seth B. Wilson, Russell J. Stewart, Xin Yu Zhou, Ralph W. Holzenthal, Steffen U. Pauls, Paul B. Frandsen

The paper reports the first long-read de novo genome assemblies of two tube case-making caddisflies, revealing substantial repetitive element expansion contributing to larger genome sizes compared to annulipalpian species.

Genome Biology and Evolution · Jan 18, 2021Peer-reviewedGenomics