Author

M. Cummins

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Approach:deep learning· 1 Organism:human· 1 Assay:long-read sequencing· 1 Organism:mouse· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

A. Ledda· 1 shared B. Cherian· 1 shared C. Rosmarin· 1 shared D. Barry· 1 shared D. Wareham· 1 shared E. Jauneikaite· 1 shared F. Delerue· 1 shared F. Lasalle· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperEvolutionary Biology

A. Ledda

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Long Read Sequencing reveals transgene concatemerization and backbone integration following AAV-driven electroporation of CRISPR RNP complexes in mouse zygotes

M. W. Luqman, P. Jenjaroenpun, J. Spathos, N. Shingte, M. Cummins, P. Nimsamer, L. M. Ittner, T. Wongsurawat, F. Delerue

The paper uses long-read sequencing to analyze unintended on-target mutations in mouse zygotes edited with AAV-delivered CRISPR RNP complexes.

Frontiers in Genome Editing · Jun 4, 2025Peer-reviewedBioengineering

Hospital outbreak of carbapenem-resistant Enterobacteriales associated with an OXA-48 plasmid carried mostly by Escherichia coli ST399

A. Ledda, M. Cummins, L. P. Shaw, E. Jauneikaite, K. Cole, F. Lasalle, D. Barry, C. Rosmarin, S. Anaraki, D. Wareham, N. Stoesser, J. Paul, R. Manuel, B. Cherian, X. Didelot

The paper investigates a hospital outbreak of carbapenem-resistant Enterobacteriales, identifying an OXA-48 plasmid in E. coli ST399 as the main driver, with evidence of plasmid conjugation and clonal expansion.

bioRxiv · Jun 15, 2020Evolutionary Biology