Author

M. Di Stefano

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 4 Cell Biology· 1

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Research Focus:chromatin & epigenetic regulation· 5 Approach:statistical model· 4 Assay:Hi-C· 3 Assay:imaging· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

M. A. Marti-Renom· 3 shared D. Jost· 2 shared A. M. Cardozo Gizzi· 1 shared A. Valeri· 1 shared C. Houbron· 1 shared C. Micheletti· 1 shared D. Bau· 1 shared D. Chamousset· 1 shared

Activity by Year

2016-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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3 shared papersBiophysics

M. A. Marti-Renom

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5 papers

Recent·Most cited

Spatial organization of chromosomes leads to heterogeneous chromatin motion and drives the liquid- or gel-like dynamical behavior of chromatin

H. Salari, M. Di Stefano, D. Jost

The paper investigates how chromosome organization and topologically-associating domains (TADs) influence chromatin motion, showing that TAD compaction drives transitions between liquid-like and gel-like dynamical states.

bioRxiv · May 10, 2021Biophysics

Polymer modelling unveils the roles of heterochromatin andnucleolar organizing regions in shaping 3D genome organization inArabidopsis thaliana

M. Di Stefano, H.-W. Nuetzmann, M. A. Marti-Renom, D. Jost

The paper uses polymer modeling to show that nucleolar organizing regions and heterochromatin drive 3D genome organization in Arabidopsis thaliana.

Nucleic Acids Research · Jan 14, 2021Peer-reviewedBiophysics

Impact of chromosome fusions on 3D genome organization and gene expression in budding yeast

M. Di Stefano, F. Di Giovanni, D. Bau, L. B. Carey, M. A. Marti-Renom, M. Mendoza

The paper examines how chromosome fusions in budding yeast affect 3D genome organization and gene expression, finding localized increases in gene expression near fusion sites.

bioRxiv · Nov 9, 2018Cell Biology

Single-cell absolute contact probability detection reveals that chromosomes are organized by multiple, low-frequency yet specific interactions

D. I. I. Cattoni, A. M. Cardozo Gizzi, M. Georgieva, M. Di Stefano, A. Valeri, D. Chamousset, C. Houbron, S. Dejardin, J.-B. Fiche, I. Gonzalez, J.-M. Chang, T. Sexton, M. A. Marti-Renom, F. Bantignies, G. Cavalli, M. Nollmann

The paper uses high-content super-resolution microscopy to show that TADs and compartments are organized by low-frequency, specific interactions regulated by epigenetics and transcription.

bioRxiv · Oct 24, 2017Biophysics

Hi-C-constrained physical models of human chromosomes recover functionally-related properties of genome organization

M. Di Stefano, J. Paulsen, T. G. Lien, E. Hovig, C. Micheletti

The paper uses Hi-C data to constrain physical models of human chromosomes, revealing functionally related properties of genome organization not used as input.

bioRxiv · Oct 17, 2016Biophysics