Author

M. J. Hubisz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:whole-genome sequencing· 3 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:clustering· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Approach:statistical model· 2 Approach:Bayesian inference· 1

Frequent Co-Authors

A. Siepel· 2 shared A. Dallmann· 1 shared A. Koren· 1 shared A. L. Williams· 1 shared A. M. Laughney· 1 shared A. N. Bracci· 1 shared A. Salman-Minkov· 1 shared B. D. Stein· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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2 shared papersEvolutionary Biology

A. Siepel

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Author profile →

4 papers

Recent·Most cited

Lineage-specific intolerance to oncogenic drivers restricts histological transformation

E. E. Gardner, E. M. Earlie, K. Li, J. Thomas, M. J. Hubisz, B. D. Stein, C. Zhang, L. C. Cantley, A. M. Laughney, H. Varmus

The paper models histological transformation of lung cancer and identifies neuroendocrine-specific tolerance to Myc as an oncogenic driver.

bioRxiv · Jun 21, 2023Cancer Biology

The evolution of the human DNA replication timing program

A. N. Bracci, A. Dallmann, Q. Ding, M. J. Hubisz, M. Caballero, A. Koren

This study examines replication timing evolution across humans, chimpanzees, and rhesus macaques, finding sequence-driven changes that impact gene regulation and chromatin structure.

bioRxiv · Aug 9, 2022Evolutionary Biology

Genomic islands of differentiation in a rapid avian radiation have been driven by recent selective sweeps

H. A. Hejase, A. Salman-Minkov, L. Campagna, M. J. Hubisz, I. J. Lovette, I. Gronau, A. Siepel

The paper identifies recent selective sweeps in genomic islands of differentiation in southern capuchino seedeaters, linking them to melanin-based plumage variation and sexual selection.

Proceedings of the National Academy of Sciences · Dec 1, 2020Peer-reviewedEvolutionary Biology

Mapping gene flow between ancient hominins through demography-aware inference of the ancestral recombination graph

M. J. Hubisz, A. L. Williams, A. Siepel

This paper introduces ARGweaver-D, a method to detect ancient gene flow between hominins by analyzing genomic data from humans, Neanderthals, and Denisovans.

bioRxiv · Jun 30, 2019Evolutionary Biology