Author

M. J. T. Reinders

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1

Frequent Co-Authors

E. B. van den Akker· 2 shared I. Khatri· 2 shared J. J. M. van Dongen· 2 shared M. A. Berkowska· 2 shared A. M. Diks· 1 shared A. M. Vos· 1 shared A. S. M. Sonnenberg· 1 shared C. Teodosio· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersImmunology

E. B. van den Akker

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3 papers

Recent·Most cited

ImmunologybioRxivOct 8, 2021

Longitudinal dynamics of human B-cell response at single-cell level in response to Tdap vaccination

I. Khatri, A. M. Diks, E. B. van den Akker…·M. A. Berkowska

This study tracks longitudinal B-cell responses to Tdap vaccination using single-cell transcriptomics and BCR repertoires, identifying clonal expansion, class switching, and antigen-specific BCRs.

DOI 10.3390/vaccines9111352

humanscRNA-seq

𝕏 PostBluesky

ImmunologybioRxivApr 9, 2020

Population matched (PM) germline allelic variants of immunoglobulin (IG) loci: New pmIG database to better understand IG repertoire and selection processes in disease and vaccination

I. Khatri, M. A. Berkowska, E. B. van den Akker…·J. J. M. van Dongen

The paper presents a new population-matched immunoglobulin (pmIG) database containing accurate germline alleles from 26 human populations, revealing evolutionary patterns and diversity in IG loci.

DOI 10.1038/s41435-021-00143-7

humanDNA methylation

𝕏 PostBluesky

MicrobiologybioRxivJul 4, 2017

Nucleus Specific Expression In The Multinucleated Mushroom-Forming Fungus Agaricus bisporus Reveals Different Nuclear Regulatory Programs

T. Gehrmann, J. F. Pelkmans, R. A. Ohm…·T. Abeel

This study identifies transcriptomic differences between two nuclear types in Agaricus bisporus, revealing functional impacts and epigenetic influences on gene expression.

DOI 10.1073/pnas.1721381115

fungi (other)bulk RNA-seq

𝕏 PostBluesky