Author

M. S. Kelly

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:protein folding & dynamics· 2 Assay:protein structure· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Organism:human· 1 Approach:mechanistic / dynamical model· 1

Frequent Co-Authors

R. I. Dima· 3 shared S. Mullen· 3 shared A. C. Macke· 2 shared R. A. Varikoti· 2 shared A. A. Fletcher· 1 shared A. Dohlman· 1 shared A. Javidi· 1 shared A. M. Eckhoff· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersBiophysics

R. I. Dima

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Author profile →

4 papers

Recent·Most cited

Searching for Structure: Characterizing the Protein Conformational Landscape with Clustering-based Algorithms

A. C. Macke, J. E. Stump, M. S. Kelly, J. Rowley, V. Herath, S. Mullen, R. I. Dima

This paper introduces StELa, a clustering method that identifies protein conformational minima more effectively than existing methods like GROMOS and CATS.

bioRxiv · Sep 13, 2023Biophysics

Comprehensive Assessment of the Intrinsic Pancreatic Microbiome

A. M. Eckhoff, A. A. Fletcher, M. S. Kelly, A. Dohlman, C. A. McIntyre, X. Shen, M. K. Iyer, D. P. Nussbaum, P. J. Allen

This study profiles the pancreatic microbiome in patients with benign, precancerous, and cancerous conditions, finding a low-biomass, low-diversity microbiome that does not differ across disease states.

bioRxiv · Aug 12, 2023Microbiology

Microtubule severing enzymes oligomerization and allostery: a tale of two domains

A. C. Macke, M. S. Kelly, R. A. Varikoti, D. Groves, C. Forbes, S. Mullen, R. I. Dima

The paper investigates the oligomerization and allostery of microtubule severing enzymes, showing that oligomer stability depends on binding partners and the type of severing protein.

bioRxiv · Jul 26, 2022Biophysics

Exploring the effect of mechanical anisotropy of protein structures in the unfoldase mechanism of AAA+ molecular machines

R. A. Varikoti, H. Y. Y. Fonseka, M. S. Kelly, A. Javidi, M. Damre, S. Mullen, J. L. Nugent, C. M. Gonzales, G. Stan, R. I. Dima

This study investigates how mechanical anisotropy in protein structures influences the unfolding mechanisms of AAA+ molecular machines like spastin and ClpY.

bioRxiv · Apr 6, 2022Biophysics