Author

M. Zagorscak

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 4

Signature Assays, Organisms & Methods

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Organism:plant (other)· 4 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:database / resource· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

K. Gruden· 4 shared M. Petek· 3 shared Z. Ramsak· 3 shared A. Coll· 2 shared C. Bleker· 2 shared M. Kriznik· 2 shared S. Baebler· 2 shared A. Bittner· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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4 shared papersPlant Biology

K. Gruden

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4 papers

Recent·Most cited

Evidence based Unification of poTato gene models with UniTato collaborative genome browser

M. Zagorscak, J. Zrimec, C. Bleker, N. Nolte, Z. Ramsak, K. Gruden, M. Petek

The paper unifies potato gene models using an Apollo web server and provides a collaborative genome browser for annotation updates.

bioRxiv · Dec 7, 2023Plant Biology

Stress Knowledge Map: A knowledge graph resource for systems biology analysis of plant stress responses

C. Bleker, Z. Ramsak, A. Bittner, V. Podpecan, M. Zagorscak, B. Wurzinger, S. Baebler, M. Petek, M. Kriznik, A. van Dieren, J. Gruber, L. Afjehi-Sadat, A. Zupanic, M. Teige, U. C. Vothknecht, K. Gruden

The paper introduces Stress Knowledge Map, a resource with two knowledge graphs for plant stress responses, and demonstrates its use in hypothesis generation and analysis.

bioRxiv · Nov 28, 2023Plant Biology

Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato

M. Petek, M. Zagorscak, Z. Ramsak, S. Sanders, S. Tomaz, E. Tseng, M. Zouine, A. Coll, K. Gruden

The paper merges and curates gene models and generates cultivar-specific and pan-transcriptomes for tetraploid potato to explore genetic diversity.

bioRxiv · Apr 18, 2020Plant Biology

Spatial accumulation of salicylic acid is regulated by RBOHD in potato immunity against viruses

T. Lukan, M. Pompe-Novak, S. Baebler, M. Tusek-Znidaric, A. Kladnik, M. Kriznik, A. Blejec, M. Zagorscak, K. Stare, B. Dusak, A. Coll, S. Pollmann, K. Morgiewicz, J. Hennig, K. Gruden

The paper investigates how RBOHD regulates spatial salicylic acid accumulation in potato immunity against viruses, showing its role in restricting virus spread.

bioRxiv · Jan 6, 2020Plant Biology