Author

J. Zrimec

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:plant (other)· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:host-pathogen & immune response· 1 Research Focus:protein folding & dynamics· 1 Assay:protein sequence· 1

Frequent Co-Authors

K. Gruden· 2 shared M. Petek· 2 shared A. Coll· 1 shared A. Taler-Vercic· 1 shared A. Usenik· 1 shared A. Zelezniak· 1 shared C. Bleker· 1 shared D. A. Jacobson· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersPlant Biology

K. Gruden

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3 papers

Recent·Most cited

Evidence based Unification of poTato gene models with UniTato collaborative genome browser

M. Zagorscak, J. Zrimec, C. Bleker, N. Nolte, Z. Ramsak, K. Gruden, M. Petek

The paper unifies potato gene models using an Apollo web server and provides a collaborative genome browser for annotation updates.

bioRxiv · Dec 7, 2023Plant Biology

The amino acid sequence determines protein abundance through its conformational stability and reduced synthesis cost.

F. Buric, S. Viknander, X. Fu, O. Lemke, J. Zrimec, L. Szyrwiel, M. Muelleder, M. Ralser, A. Zelezniak

This study shows that amino acid sequences determine protein abundance by affecting conformational stability and synthesis cost, using deep learning and yeast experiments.

bioRxiv · Oct 2, 2023Evolutionary Biology

A mini-TGA protein, lacking a functional DNA-binding domain, modulates gene expression through heterogeneous association with transcription factors

S. Tomaz, M. Petek, T. Lukan, K. Pogacar, K. Stare, E. Teixeira Prates, D. A. Jacobson, J. Zrimec, G. Bajc, M. Butala, M. Pompe Novak, Q. M. Dudley, N. Patron, A. Taler-Vercic, A. Usenik, , K. Gruden

This study shows that a truncated TGA protein, lacking a DNA-binding domain, modulates gene expression by interacting with other TGA proteins and activating immune-related genes.

bioRxiv · Mar 30, 2022 · PreprintPlant Biology