Author

Madeline A. Topf

Stanford Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:metagenomics· 1 Assay:proteomics· 1

Frequent Co-Authors

Andrew J. HryckowianiD· 1 shared Anna L. GregoryiD· 1 shared Carlos G. GonzaleziD· 1 shared Christopher D. GardneriD· 1 shared Hailey E. BussaniD· 1 shared Hannah Constance WastykiD· 1 shared Joshua Eric EliasiD· 1 shared Justin Laine SonnenburgiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 13 mutual co-author links

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1 shared paperMicrobiology

Andrew J. HryckowianORCID

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2 papers

Recent·Most cited

Impacts of perR on oxygen sensitivity, gene expression, and murine infection in Clostridioides difficile 630Δerm

Anna L. Gregory, Hailey E. Bussan, Madeline A. Topf, Andrew J. Hryckowian

This study investigates the impact of a perR mutation on oxygen sensitivity, gene expression, and infection in C. difficile 630Δerm, finding no difference in infection outcomes but altered gene expression under ambient oxygen.

Journal of Bacteriology · Jan 23, 2025Peer-reviewedMicrobiology

High-Throughput Stool Metaproteomics: Method and Application to Human Specimens

Carlos G. Gonzalez, Hannah Constance Wastyk, Madeline A. Topf, Christopher D. Gardner, Justin Laine Sonnenburg, Joshua Eric Elias

This paper introduces a high-throughput stool proteomic pipeline, SHT-Pro, and demonstrates its application in classifying dietary interventions based on proteomic profiles with up to 89% accuracy.

mSystems · Jun 29, 2020Peer-reviewedSystems Biology