Author

Manish Upadhyay

University of Mumbai

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1 Organism:virus· 1

Frequent Co-Authors

Abdelrahman Hamza AbdelmoneimiD· 1 shared Abhishek SharmaiD· 1 shared Akhil SankeriD· 1 shared Ali Gharip· 1 shared Ankit Rishi GuptaiD· 1 shared Aqsa KhalidiD· 1 shared Ashwani KumariD· 1 shared Ben Geoffrey A SiD· 1 shared

Activity by Year

2020-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Abdelrahman Hamza AbdelmoneimORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

A program to automate the discovery of drugs for West Nile and Dengue virus -- programmatic screening of over a billion compounds on PubChem, generation of drug leads and automated In Silico modelling

Ben Geoffrey A S, Akhil Sanker, Rafał Madaj, Mario Sergio Valdés Tresanco, Manish Upadhyay, Judith Gracia

The paper presents a Python program that screens over a billion compounds from PubChem using machine learning to generate drug leads for Dengue and West Nile viruses, followed by automated In Silico modelling of their interactions with methyltransferase targets.

Journal of Biomolecular Structure and Dynamics · Dec 4, 2020Peer-reviewedBioinformatics

In silico multi-epitope vaccine against covid19 showing effective interaction with HLA-B*15:03

Muniba Faiza, Tariq Abdullah, Jose F. C. Tantalean, Manish Upadhyay, Abdelrahman Hamza Abdelmoneim, Fareeha Akram, Bhupender Singh Thakur, Ibrahim Abdulaziz, Chimaobi James Ononamadu, Dina Abdelazim Ghoraba, Saba Munawar, MD Fakhrul Islam Faruque, Collins K. Kigen, Abhishek Sharma, Ashwani Kumar, , Uma Chaudhary

This paper designs an in silico multi-epitope vaccine against SARS-CoV-2 that interacts with HLA-B*15:03, showing potential for cross-protection against SARS and MERS.

bioRxiv · Jun 10, 2020 · PreprintBioinformatics