Author

Margaret C. Carpenter

Dartmouth College

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:long-read sequencing· 1 Research Focus:software / tool· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Chinmay Vaidya· 1 shared Fred KollingiD· 1 shared Leena AbdullahiD· 1 shared Li SongiD· 1 shared Margaret E. AckermaniD· 1 shared Yina H. HuangiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Chinmay Vaidya

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1 paper

Recent·Most cited

RAD: A Read-structure Agnostic Demultiplexer for Single-Cell Long-Read Sequencing and Analysis

Chinmay Vaidya, Margaret C. Carpenter, Leena Abdullah, Fred Kolling, Yina H. Huang, Li Song, Margaret E. Ackerman

RAD is a demultiplexer for single-cell long-read sequencing that improves speed and sensitivity over existing methods while supporting complex read structures.

bioRxiv · Jun 2, 2026 · PreprintBioinformatics