Author

Michael Q Zhang

The University of Texas at Dallas

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:scRNA-seq· 2 Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Hongjun Li· 1 shared Juntao Tony GaoiD· 1 shared Kaili WangiD· 1 shared Maithri Murali· 1 shared Min CheniD· 1 shared Minglei ShiiD· 1 shared Xingyu Chen· 1 shared Xinxin JuiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 16 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Hongjun Li

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

CHACAM: a cell-cell interaction-guided hierarchical attention model for high-precision cell identity annotation of scRNA-seq data in early C. elegans embryogenesis

Xingyu Chen, Xinxin Ju, Maithri Murali, Hongjun Li, Min Chen, Michael Q Zhang

CHACAM improves cell identity annotation in C. elegans scRNA-seq data by integrating cell-cell interactions and gene expression to resolve ambiguous lineages.

bioRxiv · Sep 30, 2026 · PreprintBioinformatics

Sequential-GAM constructs the single-cell geometric 3D genome structure

Yongge Li, Kaili Wang, Minglei Shi, Michael Q Zhang, Juntao Tony Gao

Sequential-GAM constructs the single-cell geometric 3D genome structure by estimating radial positions and hierarchical organization of chromosomes and genes.

Nucleic Acids Research · Jul 30, 2026Peer-reviewedGenomics