Fast gene set enrichment analysis
Gennady Korotkevich, Vladimir Sukhov, Nikolay Budin, Boris Shpak, Maxim N. Artyomov, Alexey Sergushichev
FGSEA estimates preranked GSEA P-values down to 10^-100 with predictable error in seconds to minutes, recovering more FDR-significant pathways across 605 GEO datasets than the Broad implementation.
bioRxiv · Feb 1, 2021 · PreprintBioinformatics✦ In-depth digest