Author

O. Rupp

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Ecology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

A. Becker· 2 shared A. Al-Dilaimi· 1 shared A. Braeutigam· 1 shared A. Goesmann· 1 shared A. Sczyrba· 1 shared A. Winkler· 1 shared B. Gemeinholzer· 1 shared C. Henke· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersPlant Biology

A. Becker

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Nanoliter-scale selection of optimized bioengineered peptide antibiotics that rescue mice with bacterial lung infection

N. Boehringer, Z. G. Wuisan, M. Marner, D. Kresna, U. Mettal, S. Schmitt, S. Reiter, Y. Liu, K. Brinkrolf, O. Rupp, O. Schwengers, J. I. Findeisen, S. Herold, U. Matt, T. F. Schaeberle

This study uses a mutasynthetic library to identify optimized darobactin derivatives that effectively treat bacterial lung infections in mice.

bioRxiv · May 30, 2024 · PreprintMicrobiology

GBS and a newly developed mRNA-GBS approach to link population genetic and transcriptome analyses reveal pattern differences between sites and treatments in red clover (Trifolium pratense L.)

B. Gemeinholzer, O. Rupp, A. Becker, M. Strickert, C. M. Mueller

The paper develops and evaluates an mRNA-GBS method to analyze genetic and transcriptome variation in red clover, finding it comparable to GBS but with challenges in linking transcriptome data to prior studies.

bioRxiv · Nov 30, 2021 · PreprintPlant Biology

Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems: Biocoenosis of Botryococcus consortia

O. Blifernez-Klassen, V. Klassen, D. Wibberg, E. Cebeci, C. Henke, C. Rueckert, S. Chaudhari, O. Rupp, J. Blom, A. Winkler, A. Al-Dilaimi, A. Goesmann, A. Sczyrba, J. Kalinowski, A. Braeutigam, O. Kruse

The paper analyzes the microbial consortium of Botryococcus phytoplankton, revealing functional interactions between eukaryotic and bacterial members and proposing a model for synthetic beneficial ecosystems.

bioRxiv · Dec 24, 2019 · PreprintEcology

Transcriptional changes suggest a major involvement of Gibberellins in Trifolium pratense regrowth after mowing

D. B. Herbert, T. Gross, O. Rupp, A. Becker

The paper identifies gibberellin-related genes involved in red clover regrowth after mowing using transcriptomics and shows exogenous GA application rescues regrowth morphology.

bioRxiv · Sep 19, 2019Plant Biology