Author

P. Kollmannsberger

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 4 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Approach:deep learning· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

A. Argentiero· 1 shared A. G. Solimando· 1 shared A. Kerscher· 1 shared A. Marquardt· 1 shared A. Matsuo· 1 shared A. Petersen· 1 shared A. West· 1 shared B. Morriswood· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperCancer Biology

A. Argentiero

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Author profile →

5 papers

Recent·Most cited

Multicellular dynamics on structured surfaces: Stress concentration is a key to controlling complex microtissue morphology on engineered scaffolds

R. Matsuzawa, A. Matsuo, S. Fukamachi, S. Shimada, M. Takeuchi, T. Nishina, P. Kollmannsberger, R. Sudo, S. Okuda, T. Yamashita

This study identifies stress concentration as a key factor in microtissue detachment from engineered scaffolds and develops a computational model to predict and control this process.

bioRxiv · Mar 6, 2023Biophysics

Single-molecule fluorescence microscopy demonstrates fast dynamics of the variant surface glycoprotein coat on living trypanosomes

M. Schwebs, T. Paul, M. Glogger, L. Forster, B. Morriswood, J. Tessmar, J. Groll, M. Engstler, P. Kollmannsberger, S. Fenz

The paper uses single-molecule tracking to show that VSG coat dynamics on trypanosomes are primarily diffusive with a high diffusion coefficient, resolving how the parasite maintains its coat.

bioRxiv · Aug 3, 2022 · PreprintBiophysics

Visual Clustering of Transcriptomic Data from Primary and Metastatic Tumors - Dependencies and Novel Pitfalls

A. Marquardt, P. Kollmannsberger, M. Krebs, A. Argentiero, M. Knott, A. G. Solimando, A. Kerscher

The paper evaluates how data transformation and dimension reduction methods affect clustering of transcriptomic data from metastases and primary tumors, finding no strong link between tumor site and cluster formation.

bioRxiv · Dec 3, 2021Cancer Biology

Biological network growth in complex environments - a computational framework

T. J. Paul, P. Kollmannsberger

The paper introduces a computational framework to model spatial biological network growth under spatial constraints and demonstrates it using osteocyte networks.

PLOS Computational Biology · Nov 30, 2020Peer-reviewedBiophysics

Surface tension determines tissue shape and growth kinetics

S. Ehrig, C. M. Bidan, A. West, C. Jacobi, K. Lam, P. Kollmannsberger, A. Petersen, P. Tomancak, K. Kommareddy, F. D. Fischer, P. Fratzl, J. W. C. Dunlop

The paper investigates how surface tension influences tissue shape and growth kinetics, showing that even tissues with extracellular matrices can exhibit fluid-like growth behavior.

bioRxiv · Oct 29, 2018Biophysics