Author

Pedro Beltrao

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 3 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

David OchoaiD· 2 shared Andrej Sali· 1 shared Athanasios TypasiD· 1 shared Bachir El Debs· 1 shared Emanuel GonçalvesiD· 1 shared Jeffrey R. JohnsoniD· 1 shared Joel SelkrigiD· 1 shared Judit Villen· 1 shared

Activity by Year

2014-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersSystems Biology

David OchoaORCID

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Author profile →

3 papers

Recent·Most cited

Systematic analysis of transcriptional and post-transcriptional regulation of metabolism in yeast

Emanuel Gonçalves, Zrinka Raguz, Mattia Zampieri, Omar Wagih, David Ochoa, Uwe Sauer, Pedro Beltrao, Julio Saez-Rodriguez

This study integrates metabolomics, phosphoproteomics, and transcriptomics data in yeast to identify regulatory mechanisms linking signaling kinases to metabolic changes.

PLOS Computational Biology · Jan 10, 2017Peer-reviewedSystems Biology

An Atlas of Human Kinase Regulation

David Ochoa, Mindaugas Jonikas, Robert T Lawrence, Bachir El Debs, Joel Selkrig, Athanasios Typas, Judit Villen, Silvia Santos, Pedro Beltrao

This paper constructs a kinase regulation atlas using phosphopeptide quantifications to identify co-regulated kinases and their functional relationships, revealing key mediators in stem cell differentiation and Salmonella infection.

bioRxiv · Aug 4, 2016Systems Biology

Conservation and structural analysis of the Xenopus laevis phospho-proteome

Jeffrey R. Johnson, Silvia D. Santos, Tasha Johnson, Ursula Pieper, Andrej Sali, Nevan J. Krogan, Pedro Beltrao

The paper analyzes the phosphoproteome of Xenopus laevis, identifies conserved phosphorylation sites, and links them to structural flexibility and functional regulation.

bioRxiv · Sep 14, 2014 · PreprintEvolutionary Biology