Author

Peijie Lin

Victor Chang Cardiac Research Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 3 Research Focus:benchmarking· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Joshua W. K. HoiD· 3 shared Michael TroupiD· 2 shared Andrew R. LloydiD· 1 shared Andrian YangiD· 1 shared Auda A. EltahlaiD· 1 shared Fabio LucianiiD· 1 shared Rowena Anne BulliD· 1 shared Simone RizzettoiD· 1 shared

Activity by Year

2016-2017 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 24 mutual co-author links

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3 shared papersBioinformatics

Joshua W. K. HoORCID

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3 papers

Recent·Most cited

Impact Of Sequencing Depth And Read Length On Single Cell RNA Sequencing Data: Lessons From T Cells

Simone Rizzetto, Auda A. Eltahla, Peijie Lin, Rowena Anne Bull, Andrew R. Lloyd, Joshua W. K. Ho, Vanessa Venturi, Fabio Luciani

This study examines how sequencing depth and read length affect scRNA-seq data quality, finding that sufficient depth and length improve TCRβ reconstruction and gene expression accuracy in T cells.

Scientific Reports · Oct 2, 2017Peer-reviewedBioinformatics

CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-Seq data

Peijie Lin, Michael Troup, Joshua W. K. Ho

CIDR improves clustering accuracy for scRNA-Seq data by using implicit imputation and dimensionality reduction, outperforming existing methods like t-SNE and ZIFA.

Genome biology · Mar 28, 2017Peer-reviewedBioinformatics

Falco: A quick and flexible single-cell RNA-seq processing framework on the cloud

Andrian Yang, Michael Troup, Peijie Lin, Joshua W. K. Ho

Falco accelerates and reduces the cost of scRNA-seq analysis by parallelizing pipelines on cloud infrastructure.

Bioinformatics · Nov 16, 2016Peer-reviewedBioinformatics