Author

Piotr Hajduk

Wrocław University of Environmental and Life Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Joanna SzydaiD· 2 shared Magda MielczarekiD· 2 shared Marek SztukaiD· 2 shared David C. HuybeniD· 1 shared Dawid SłomianiD· 1 shared Falk HildebrandiD· 1 shared Jakub LiuiD· 1 shared Katarzyna SidorczukiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersMicrobiology

Joanna SzydaORCID

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2 papers

Recent·Most cited

Supplementation with effective microorganisms in earthen ponds affects common carp growth but not overall microbial communities

Michalina Jakimowicz, Katarzyna Sidorczuk, David C. Huyben, Falk Hildebrand, Łukasz Napora-Rutkowski, Piotr Hajduk, Marek Sztuka, Magda Mielczarek, Dawid Słomian, Urszula Szulc, Laura Jarosz, Joanna Szyda

This study shows that adding effective microorganisms to feed and pond water improves common carp growth without changing microbial communities.

bioRxiv · Jul 7, 2025 · PreprintMicrobiology

Nextflow vs. plain Bash: Different Approaches to the Parallelisation of SNP Calling from the Whole Genome Sequence Data

Marek Sztuka, Krzysztof Kotlarz, Magda Mielczarek, Piotr Hajduk, Jakub Liu, Joanna Szyda

This paper compares SNP calling workflow parallelisation using plain Bash and Nextflow, finding that multi-process Nextflow is faster but uses more RAM and disk space.

NAR Genomics and Bioinformatics · Apr 4, 2024Peer-reviewedBioinformatics