Author

Prakash Vaithyanathan

Indian Institute of Technology Madras

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:protein structure prediction· 1 Approach:simulation· 1

Frequent Co-Authors

Ayarivan PuratchikodyiD· 1 shared Harishchander AnandaramiD· 1 shared N Irfan· 1 shared S Mohammed ZaidhiD· 1 shared S. Priya Varshini· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

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1 shared paperBioinformatics

Ayarivan PuratchikodyORCID

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3 papers

Recent·Most cited

Molecular and Quantum Mechanical Studies of Interaction Between Tetrahydrocurcumin Derivative and PCSK9 Protein to Provide a Basis for an Oral Pill to Remove Bad Cholesterol

Prakash Vaithyanathan

This study evaluates the interaction between a tetrahydrocurcumin derivative and PCSK9 protein using computational methods, showing improved binding affinity compared to atorvastatin.

bioRxiv · Jul 4, 2023 · PreprintBioinformatics

Active and Allosteric Site Binding MOLECULAR MECHANICS-QUANTUM MECHANICS studies of STEVIOSIDE Derivative in PCSK9 Protein Intended to provide a safe Antilipidemic agent

N Irfan, Prakash Vaithyanathan, Harishchander Anandaram, S Mohammed Zaidh, S. Priya Varshini, Ayarivan Puratchikody

The paper evaluates the PCSK9 antagonistic effect of a Stevioside derivative and Atorvastatin using molecular docking and MD simulations, finding the derivative has higher binding affinity in both active and allosteric sites.

bioRxiv · May 4, 2023 · PreprintBioinformatics

Identification of binding interaction between Curcumin derivative and PERK13 Proline rich receptor like protein kinase protein using In silico docking techniques - to help plants tackle salt water

Prakash Vaithyanathan

This study uses in silico docking to investigate the binding interaction between a curcumin derivative and the PERK13 protein to enhance plants' ability to handle salt water.

bioRxiv · Oct 15, 2021 · PreprintBioinformatics