Author

Qingran Cai

Shanghai Jiao Tong University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:protein design· 2 Research Focus:benchmarking· 1 Research Focus:drug response / drug discovery· 1 Assay:electronic health records· 1 Assay:protein sequence· 1

Frequent Co-Authors

Mingyang XuiD· 3 shared Zaixi ZhangiD· 3 shared Jiaxian YaniD· 2 shared Ruofan JiniD· 2 shared Cao He· 1 shared Chuang ZhaoiD· 1 shared Dongyao Wang· 1 shared Fei Meng· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersBioinformatics

Mingyang XuORCID

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Author profile →

3 papers

Recent·Most cited

Chain of Structures: Connecting Reasoning and Generation for Protein Design

Qingran Cai, Mingyang Xu, Jiaxian Yan, Zhicai Wang, Yufeng Liu, Qizhi Pei, Zaixi Zhang

The paper introduces a method for protein design that connects reasoning and generation through structural states, achieving high performance on a benchmark.

bioRxiv · Oct 11, 2026 · PreprintBioinformatics

BioClaw: Human-Bot Research Collaboration Ecosystems in Group Chats

Mingyang Xu, Jiaxian Yan, Runchuan Feng, Qingran Cai, P W Zhang, Chuang Zhao, Cao He, 魏宗婷, J Li, Shiyi Lin, Hongyu Dong, Ruofan Jin, Tingjun Hou, Qi Liu, Zaixi Zhang

BioClaw enables human-bot collaboration in group chats to execute biomedical analyses using containerized tools and workflows across multiple domains and data types.

bioRxiv · Apr 14, 2026 · PreprintBioinformatics

STELLA: Self-Evolving LLM Agent for Biomedical Research

Ruofan Jin, Mingyang Xu, Fei Meng, Guancheng Wan, Qingran Cai, Yize Jiang, Jin Han, Yuanyuan Chen, Wanqing Lu, Mengyang Wang, Zhiqian Lan, Yuxuan Jiang, Junhong Liu, Dongyao Wang, Le Cong, Zaixi Zhang

STELLA is a self-evolving AI agent that improves through interaction, achieving high performance in biomedical tasks and driving experimental discoveries in oncology and protein engineering.

bioRxiv · Jul 1, 2025 · PreprintBioinformatics