Author

R. D. Stewart

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Cancer Biology· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Organism:chicken / avian· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

M. Watson· 2 shared A. W. Walker· 1 shared A. Warr· 1 shared C. Amstadt· 1 shared D. Miles· 1 shared D. R. Noguera· 1 shared G. Moffitt· 1 shared G. Sandison· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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2 shared papersMicrobiology

M. Watson

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Leveraging machine learning and citizen science data to describe flowering phenology across South Africa

R. D. Stewart, N. Bard, M. van der Bank, J. Davies

The paper uses machine learning to classify flowering phenology from citizen science images, revealing peak flower production and flowering season length for many South African plant species.

bioRxiv · Dec 21, 2023Ecology

Refinement of the "Candidatus Accumulibacter" Genus Based on a Metagenomic Analysis of Biological Nutrient Removal (BNR) Pilot-Scale Plants Operated with Reduced Aeration

R. D. Stewart, K. S. Myers, C. Amstadt, M. Seib, K. McMahon, D. R. Noguera

This paper refines the 'Candidatus Accumulibacter' genus classification using genome-resolved metagenomics from low-aeration BNR plants, identifying a new species and improving phylogenetic understanding.

bioRxiv · Nov 20, 2023 · PreprintMicrobiology

Differential effects of high versus low linear energy transfer (LET) radiation on type-I interferon (IFNβ) and TREX1 responses

D. Miles, N. Cao, G. Sandison, R. D. Stewart, G. Moffitt, T. H. Pulliam, U. Parvathaneni, P. Goff, P. Nghiem, K. Stantz

This study compares the effects of high-LET fast neutrons and low-LET x-rays on IFNβ and TREX1 responses in MCC cells, finding higher RBE for IFNβ and TREX1 with neutrons.

bioRxiv · Jul 7, 2021 · PreprintCancer Biology

Assembly of hundreds of novel bacterial genomes from the chicken caecum

L. Glendinning, R. D. Stewart, M. J. Pallen, K. A. Watson, M. Watson

The paper assembles 469 draft bacterial genomes from chicken caecal samples, identifying 460 novel strains, 283 novel species, and 42 novel genera, and shows breed- and diet-specific microbiomes in European chickens.

bioRxiv · Jul 16, 2019Microbiology

The genomic and proteomic landscape of the rumen microbiome revealed by comprehensive genome-resolved metagenomics

R. D. Stewart, M. D. Auffret, A. Warr, A. W. Walker, R. Roehe, M. Watson

The paper analyzes the rumen microbiome using genome-resolved metagenomics to reveal its genomic and proteomic landscape.

bioRxiv · Dec 8, 2018Microbiology