R. J. Abdill

Integration of 168,000 samples reveals global patterns of the human gut microbiome

The paper integrates 168,484 human gut microbiome samples to reveal global patterns, showing widespread presence of Firmicutes and regional differences in microbial genera.

Public human microbiome data dominated by highly developed countries

The paper analyzes global distribution of human microbiome samples and finds they are heavily skewed toward developed countries, with underrepresentation from central and southern Asia.

BiomeHorizon: visualizing microbiome time series data in R

BiomeHorizon is an R package that visualizes longitudinal microbiome time series data using horizon plots, providing proportional and absolute abundance changes across taxa and subjects.

Comparing quality of reporting between preprints and peer-reviewed articles in the biomedical literature

This study compares reporting quality between preprints and peer-reviewed articles, finding peer-reviewed articles have slightly better reporting quality but preprints are still valid scientific contributions.

International authorship and collaboration across bioRxiv preprints

This study analyzes bioRxiv preprints to examine international authorship and collaboration patterns across countries.

Tracking the popularity and outcomes of all bioRxiv preprints

Crawled metadata for all 37,648 bioRxiv preprints through November 2018 reveal accelerating submissions and downloads, 67.0 percent publication of 2013-2016 preprints, and a public Rxivist database.