Author

R. Tofanelli

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3

Signature Assays, Organisms & Methods

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Assay:imaging· 3 Organism:Arabidopsis· 2 Research Focus:cell type annotation· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1 Assay:fluorescence / live-cell microscopy· 1

Frequent Co-Authors

A. Vijayan· 3 shared K. Schneitz· 3 shared A. Kreshuk· 2 shared A. Wolny· 2 shared L. Cerrone· 2 shared R. S. Smith· 2 shared S. Strauss· 2 shared A. Bailoni· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersPlant Biology

A. Vijayan

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Author profile →

3 papers

Recent·Most cited

The annotation and analysis of complex 3D plant organs using 3DCoordX

A. Vijayan, S. Strauss, R. Tofanelli, T. A. Mody, K. Lee, M. Tsiantis, R. S. Smith, K. Schneitz

The paper develops 3DCoordX, a tool for spatially annotating cells in 3D plant organs, revealing new insights into growth patterns across species.

bioRxiv · Nov 20, 2021Plant Biology

A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule

A. Vijayan, R. Tofanelli, S. Strauss, L. Cerrone, A. Wolny, J. Strohmeier, A. Kreshuk, F. Hamprecht, R. S. Smith, K. Schneitz

The paper creates a 3D digital atlas of Arabidopsis ovule development, revealing cellular growth patterns and new functions in morphogenesis.

bioRxiv · Sep 19, 2020Plant Biology

Accurate And Versatile 3D Segmentation Of Plant Tissues At Cellular Resolution

A. Wolny, L. Cerrone, A. Vijayan, R. Tofanelli, A. V. Barro, M. Louveaux, C. Wenzl, S. Steigleder, C. Pape, A. Bailoni, S. Duran-Nebreda, G. Bassel, J. U. Lohmann, F. A. Hamprecht, K. Schneitz, , A. Kreshuk

PlantSeg provides a deep learning-based pipeline for accurate 3D segmentation of plant tissues into individual cells across various developmental contexts.

bioRxiv · Jan 17, 2020Plant Biology